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SRX9572284: The raw datas of 10X genomics and PacBio to update the canfam3 reference
1 PACBIO_SMRT (PacBio RS II) run: 672,487 spots, 5.9G bases, 1.4Gb downloads

Design: PacBio sequence for 20K lib
Submitted by: Kunming Institute of Zoology, CAS
Study: Boxer 7.6x whole genome shotgun assembly by the Dog Genome Sequencing Consortium
show Abstracthide Abstract
The Dog Genome Sequencing Consortium, led by the <a href="http://www.broad.mit.edu/mammals/dog/">Broad Institute</a>, sequenced the <i>Canis lupus familiaris</i> genome at 7.6x coverage using a whole genome shotgun (WGS) strategy and DNA derived from a female boxer. The breed was chosen following an analysis of 60 dog breeds that demonstrated that the boxer is one of the breeds with the least amount of variation in its genome. The WGS sequences have been deposited at GenBank/EMBL/DDBJ under the project accession <a href="http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=50211262">AAEX01000000</a>.
Sample:
SAMN02953603 • SRS7774051 • All experiments • All runs
Library:
Name: PacBio sequence of Boxer_Tasha cell55
Instrument: PacBio RS II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 672,487 spots, 5.9G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR13131606672,4875.9G1.4Gb2020-11-25

ID:
12503699

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